Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AC092474.2-201ENST00000424288 719 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 ALG1L5P-201ENST00000482043 771 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 FAM86C2P-203ENST00000528684 1004 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 RARRES2P8-201ENST00000566335 367 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 WASH6P-202ENST00000359512 1437 ntBASIC14.39□□□□□ -0.11
CDH20Q9HBT6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH20Q9HBT6 AL031731.1-201ENST00000642131 2094 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 PCDH8P1-201ENST00000428983 2773 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 GPAA1P2-202ENST00000606848 1787 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 UPF3AP3-201ENST00000420996 769 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AL671277.1-201ENST00000429656 993 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CEND1P1-201ENST00000451006 455 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms