Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
EFCC1Q9HA90 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
EFCC1Q9HA90 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EFCC1Q9HA90 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
EFCC1Q9HA90 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
EFCC1Q9HA90 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 RN7SL837P-201ENST00000463010 287 ntBASIC19.08■□□□□ 0.64
EFCC1Q9HA90 DOC2GP-202ENST00000514950 1163 ntBASIC19.08■□□□□ 0.64
EFCC1Q9HA90 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AP005482.1-201ENST00000563722 1273 ntBASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 AC007431.3-201ENST00000623221 587 ntBASIC19.08■□□□□ 0.64
EFCC1Q9HA90 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EFCC1Q9HA90 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 AL021920.2-201ENST00000624828 1351 ntBASIC19.07■□□□□ 0.64
EFCC1Q9HA90 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 AC234783.1-201ENST00000441761 496 ntBASIC19.07■□□□□ 0.64
EFCC1Q9HA90 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 COX11-210ENST00000639671 696 ntBASIC19.07■□□□□ 0.64
EFCC1Q9HA90 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EFCC1Q9HA90 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 KRT223P-202ENST00000449164 1292 ntBASIC19.06■□□□□ 0.64
EFCC1Q9HA90 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 AC133552.6-201ENST00000613406 534 ntBASIC19.06■□□□□ 0.64
EFCC1Q9HA90 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFCC1Q9HA90 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms