Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AL390039.1-201ENST00000399148 611 ntBASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 FGA-203ENST00000622532 1130 ntTSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 AC092068.3-201ENST00000587894 2016 ntBASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC112698.1-201ENST00000510299 916 ntBASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC060834.1-201ENST00000443027 2032 ntBASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 AC092171.3-201ENST00000610122 2651 ntBASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCAF1Q9H7N4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 HILS1-202ENST00000545329 423 ntBASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCAF1Q9H7N4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 AL138688.1-201ENST00000624851 1594 ntBASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.64■■□□□ 1.53
SCAF1Q9H7N4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms