Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 CICP17-201ENST00000418553 2377 ntBASIC13.35□□□□□ -0.27
NKX6-2Q9C056 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AL645728.1-201ENST00000366221 2101 ntBASIC13.35□□□□□ -0.27
NKX6-2Q9C056 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 AL356585.2-201ENST00000625078 2396 ntBASIC13.35□□□□□ -0.27
NKX6-2Q9C056 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-2Q9C056 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.34□□□□□ -0.27
NKX6-2Q9C056 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 AC112698.1-201ENST00000510299 916 ntBASIC13.34□□□□□ -0.27
NKX6-2Q9C056 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 FAM197Y4-202ENST00000622692 608 ntBASIC13.34□□□□□ -0.27
NKX6-2Q9C056 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 AP003680.1-201ENST00000598970 3660 ntBASIC13.34□□□□□ -0.27
NKX6-2Q9C056 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-2Q9C056 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms