Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC112504.1-201ENST00000623415 1841 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC010491.1-201ENST00000563101 2797 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 RPSAP43-201ENST00000402237 625 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC023274.1-201ENST00000418278 595 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC087163.2-201ENST00000457299 853 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC040169.1-201ENST00000565382 521 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 AC020765.3-201ENST00000613051 740 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 CDC14C-201ENST00000428251 1719 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 MST1L-201ENST00000442552 2185 ntBASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXP3Q9BZS1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 REXO1L8P-201ENST00000604378 1897 ntBASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 MIR3687-2-201ENST00000577708 61 ntBASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 CYP2A7P1-201ENST00000595391 815 ntBASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 MIR3687-1-201ENST00000614492 61 ntBASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 AC005593.1-201ENST00000624894 515 ntBASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms