Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 API5-211ENST00000534695 560 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 CR383656.12-201ENST00000549567 513 ntBASIC17.05■□□□□ 0.32
LRRC3Q9BY71 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.05■□□□□ 0.32
LRRC3Q9BY71 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.05■□□□□ 0.32
LRRC3Q9BY71 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.05■□□□□ 0.32
LRRC3Q9BY71 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 NME2P1-201ENST00000426182 414 ntBASIC17.04■□□□□ 0.32
LRRC3Q9BY71 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 AC027307.3-201ENST00000594262 1100 ntBASIC17.04■□□□□ 0.32
LRRC3Q9BY71 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 BTBD7P1-201ENST00000447253 1453 ntBASIC17.04■□□□□ 0.32
LRRC3Q9BY71 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC3Q9BY71 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 KRT8P12-202ENST00000472924 1397 ntBASIC17.03■□□□□ 0.32
LRRC3Q9BY71 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms