Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 GRK6P1-201ENST00000400595 1711 ntBASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 MIR4469-201ENST00000583919 79 ntBASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 AC006538.1-201ENST00000567905 1585 ntBASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 HTR5BP-201ENST00000430851 1154 ntBASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 MKNK2P1-201ENST00000437526 628 ntBASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 OR7E47P-204ENST00000575924 449 ntBASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 REXO1L11P-201ENST00000620964 1927 ntBASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF4Q9BUZ4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 BCAR1-209ENST00000546196 1340 ntBASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 PI4KAP1-204ENST00000612579 1703 ntBASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAF4Q9BUZ4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms