Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 AC096734.2-201ENST00000562054 433 ntBASIC14.59□□□□□ -0.07
VRK1Q99986 AC134684.3-201ENST00000641758 218 ntBASIC14.59□□□□□ -0.07
VRK1Q99986 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VRK1Q99986 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK1Q99986 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK1Q99986 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK1Q99986 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
VRK1Q99986 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VRK1Q99986 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.58□□□□□ -0.07
VRK1Q99986 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.58□□□□□ -0.07
VRK1Q99986 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.58□□□□□ -0.07
VRK1Q99986 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VRK1Q99986 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.58□□□□□ -0.07
VRK1Q99986 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.07
VRK1Q99986 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
VRK1Q99986 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VRK1Q99986 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VRK1Q99986 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VRK1Q99986 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VRK1Q99986 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.58□□□□□ -0.08
VRK1Q99986 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.58□□□□□ -0.08
VRK1Q99986 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.58□□□□□ -0.08
VRK1Q99986 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.58□□□□□ -0.08
VRK1Q99986 AC023141.13-201ENST00000604991 943 ntBASIC14.58□□□□□ -0.08
VRK1Q99986 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
VRK1Q99986 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.58□□□□□ -0.08
VRK1Q99986 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.58□□□□□ -0.08
VRK1Q99986 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.58□□□□□ -0.08
VRK1Q99986 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VRK1Q99986 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VRK1Q99986 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.57□□□□□ -0.08
VRK1Q99986 AC092183.1-201ENST00000469884 875 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 CXCL1P1-201ENST00000502804 216 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
VRK1Q99986 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.57□□□□□ -0.08
VRK1Q99986 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.57□□□□□ -0.08
VRK1Q99986 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 AL078644.1-201ENST00000609881 752 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 AL596442.2-201ENST00000610240 980 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms