Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC105021.1-202ENST00000570572 669 ntBASIC17.65■□□□□ 0.42
SNX27Q96L92 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
SNX27Q96L92 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 U82695.1-201ENST00000635752 1889 ntBASIC17.65■□□□□ 0.42
SNX27Q96L92 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX27Q96L92 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SNX27Q96L92 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX27Q96L92 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.64■□□□□ 0.42
SNX27Q96L92 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.64■□□□□ 0.42
SNX27Q96L92 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.42
SNX27Q96L92 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX27Q96L92 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX27Q96L92 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX27Q96L92 BASP1P1-201ENST00000430708 665 ntBASIC17.64■□□□□ 0.41
SNX27Q96L92 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.64■□□□□ 0.41
SNX27Q96L92 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX27Q96L92 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX27Q96L92 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNX27Q96L92 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNX27Q96L92 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNX27Q96L92 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX27Q96L92 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX27Q96L92 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
SNX27Q96L92 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX27Q96L92 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX27Q96L92 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 MIR661-201ENST00000384842 89 ntBASIC17.63■□□□□ 0.41
SNX27Q96L92 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX27Q96L92 HLA-V-204ENST00000476601 1289 ntBASIC17.63■□□□□ 0.41
SNX27Q96L92 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX27Q96L92 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.63■□□□□ 0.41
SNX27Q96L92 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 RN7SL828P-201ENST00000607615 303 ntBASIC17.63■□□□□ 0.41
SNX27Q96L92 AL138828.2-201ENST00000615812 383 ntBASIC17.63■□□□□ 0.41
SNX27Q96L92 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX27Q96L92 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX27Q96L92 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNX27Q96L92 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX27Q96L92 ALOX12P2-203ENST00000570921 1945 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNX27Q96L92 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms