Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 AC140878.1-201ENST00000565277 250 ntBASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC107890.1-201ENST00000422478 521 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC245100.5-201ENST00000452108 331 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC125807.1-201ENST00000483097 614 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AC003101.2-201ENST00000612557 442 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 AL035456.1-201ENST00000456064 1369 ntBASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.34■□□□□ 0.21
ECHDC3Q96DC8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 AC099398.1-201ENST00000567919 2776 ntBASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ECHDC3Q96DC8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ECHDC3Q96DC8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms