Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.24□□□□□ -0.45
RNF183Q96D59 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 METTL21AP1-201ENST00000438852 635 ntBASIC12.24□□□□□ -0.45
RNF183Q96D59 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.24□□□□□ -0.45
RNF183Q96D59 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.24□□□□□ -0.45
RNF183Q96D59 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 AC087641.1-201ENST00000557561 1021 ntBASIC12.24□□□□□ -0.45
RNF183Q96D59 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.24□□□□□ -0.45
RNF183Q96D59 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 KRT8P49-201ENST00000604166 1432 ntBASIC12.24□□□□□ -0.45
RNF183Q96D59 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF183Q96D59 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RNF183Q96D59 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF183Q96D59 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RNF183Q96D59 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
RNF183Q96D59 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RNF183Q96D59 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 AL355306.1-201ENST00000415580 579 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 SPDYE11-202ENST00000450699 704 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF183Q96D59 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.23□□□□□ -0.45
RNF183Q96D59 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF183Q96D59 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.23□□□□□ -0.45
RNF183Q96D59 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF183Q96D59 AC124947.2-201ENST00000547118 1133 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 SPDYE9P-201ENST00000570642 692 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF183Q96D59 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF183Q96D59 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RNF183Q96D59 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.23□□□□□ -0.45
RNF183Q96D59 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 AC026120.1-201ENST00000611536 926 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 SPDYE10P-202ENST00000612005 668 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 SPDYE8P-202ENST00000612377 668 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.23□□□□□ -0.45
RNF183Q96D59 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms