Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
USP9XQ93008 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 RPL13AP25-201ENST00000484130 612 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.08□□□□□ -0.16
USP9XQ93008 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 INTS4P2-202ENST00000614726 2019 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 TOMM22P5-201ENST00000416399 439 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 CNN2P8-201ENST00000421872 913 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.07□□□□□ -0.16
USP9XQ93008 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 FTLP10-202ENST00000505798 471 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 AP001063.1-201ENST00000568332 529 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.07□□□□□ -0.16
USP9XQ93008 CLUHP6-201ENST00000580789 941 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
USP9XQ93008 DGAT2L7P-201ENST00000602462 744 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 AC018635.2-201ENST00000608625 364 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
USP9XQ93008 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USP9XQ93008 RN7SL818P-201ENST00000485099 259 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 RN7SL725P-201ENST00000606439 259 ntBASIC14.07□□□□□ -0.16
USP9XQ93008 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USP9XQ93008 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.07□□□□□ -0.16
USP9XQ93008 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.06□□□□□ -0.16
USP9XQ93008 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 AC006277.1-201ENST00000624348 1610 ntBASIC14.06□□□□□ -0.16
USP9XQ93008 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USP9XQ93008 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
USP9XQ93008 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms