Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC013726.1-201ENST00000563747 2285 ntBASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 SIGLEC30P-201ENST00000455569 941 ntBASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AL590326.2-201ENST00000625139 305 ntBASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AC104581.4-201ENST00000623126 3052 ntBASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 CYP2D8P-201ENST00000433633 1490 ntBASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MBD3L1Q8WWY6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AC008677.1-201ENST00000519230 1561 ntBASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AC005336.2-201ENST00000593183 939 ntBASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 Z99916.2-201ENST00000604037 246 ntBASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AC010947.1-201ENST00000623454 693 ntBASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
MBD3L1Q8WWY6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms