Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
PRUNE2Q8WUY3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRUNE2Q8WUY3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRUNE2Q8WUY3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 CYP46A4P-201ENST00000414953 267 ntBASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC093724.1-201ENST00000448659 1027 ntBASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC044849.1-201ENST00000519737 1188 ntBASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 PRKXP1-201ENST00000561423 1122 ntBASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 AC073352.2-201ENST00000609385 439 ntBASIC16.81■□□□□ 0.28
PRUNE2Q8WUY3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 AC104596.2-201ENST00000512793 793 ntBASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 MIR3147-201ENST00000577811 66 ntBASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 AC138649.2-201ENST00000615886 705 ntBASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 AC004408.2-201ENST00000623613 2777 ntBASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 CTBP2P4-201ENST00000513884 920 ntBASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRUNE2Q8WUY3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 AC092053.1-201ENST00000605787 1936 ntBASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 RPL13P2-201ENST00000440687 659 ntBASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 FAM86LP-201ENST00000478302 853 ntBASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 SNX33P1-201ENST00000592116 1762 ntBASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms