Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 AL078644.1-201ENST00000609881 752 ntBASIC14.39□□□□□ -0.11
CPEB3Q8NE35 AL161645.1-201ENST00000622716 1255 ntBASIC14.39□□□□□ -0.11
CPEB3Q8NE35 C20orf181-201ENST00000623918 480 ntBASIC14.39□□□□□ -0.11
CPEB3Q8NE35 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPEB3Q8NE35 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 WASH6P-202ENST00000359512 1437 ntBASIC14.38□□□□□ -0.11
CPEB3Q8NE35 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPEB3Q8NE35 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 KRT18P34-201ENST00000488218 1270 ntBASIC14.37□□□□□ -0.11
CPEB3Q8NE35 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AC092865.5-201ENST00000545435 363 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms