Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNNM3Q8NE01 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PAUPAR-201ENST00000630360 2965 ntBASIC18.77■□□□□ 0.6
CNNM3Q8NE01 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 AC112482.1-201ENST00000492080 688 ntBASIC18.77■□□□□ 0.6
CNNM3Q8NE01 AC087641.1-201ENST00000557561 1021 ntBASIC18.77■□□□□ 0.6
CNNM3Q8NE01 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNNM3Q8NE01 PCGF3-213ENST00000620529 1899 ntBASIC18.77■□□□□ 0.6
CNNM3Q8NE01 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNNM3Q8NE01 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNNM3Q8NE01 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.77■□□□□ 0.59
CNNM3Q8NE01 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AC129492.6-201ENST00000611383 1305 ntBASIC18.76■□□□□ 0.59
CNNM3Q8NE01 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.76■□□□□ 0.59
CNNM3Q8NE01 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AC096734.2-201ENST00000562054 433 ntBASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AC005412.3-201ENST00000580309 715 ntBASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AP001350.2-201ENST00000625104 1094 ntBASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNNM3Q8NE01 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms