Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 MPDU1-223ENST00000582151 728 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 NDUFV2P1-201ENST00000596415 907 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 AC128714.1-201ENST00000637035 887 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 ACTG1P3-201ENST00000431775 1114 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 RHOXF1P1-202ENST00000635473 501 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 SLC25A24-204ENST00000569674 2357 ntBASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCDC168Q8NDH2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 AC020765.3-201ENST00000613051 740 ntBASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC168Q8NDH2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 AC061975.2-201ENST00000581722 295 ntBASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 AC093503.3-201ENST00000624917 2352 ntBASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC168Q8NDH2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 ENPP7P5-201ENST00000541031 1031 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms