Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAM1L1Q8N609 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 MIR6080-201ENST00000617359 66 ntBASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AC093028.1-201ENST00000622998 982 ntBASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AL118508.1-201ENST00000613502 2345 ntBASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAM1L1Q8N609 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AC006449.6-201ENST00000612330 2296 ntBASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CNN2P2-201ENST00000443536 909 ntBASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CNN2P3-201ENST00000450201 906 ntBASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AC015911.4-201ENST00000588022 1070 ntBASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AL136317.3-201ENST00000618497 906 ntBASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAM1L1Q8N609 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms