Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 FRMD8P1-201ENST00000440433 1524 ntBASIC17.82■□□□□ 0.44
VPS52Q8N1B4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC021097.1-201ENST00000607902 574 ntBASIC17.81■□□□□ 0.44
VPS52Q8N1B4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC012645.4-201ENST00000610691 1061 ntBASIC17.81■□□□□ 0.44
VPS52Q8N1B4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 AC060834.1-201ENST00000443027 2032 ntBASIC17.81■□□□□ 0.44
VPS52Q8N1B4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS52Q8N1B4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 AC241585.1-201ENST00000433527 519 ntBASIC17.8■□□□□ 0.44
VPS52Q8N1B4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 AC005225.4-201ENST00000557330 545 ntBASIC17.8■□□□□ 0.44
VPS52Q8N1B4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 LINC02012-201ENST00000608206 1725 ntBASIC17.8■□□□□ 0.44
VPS52Q8N1B4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VPS52Q8N1B4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AC142381.1-201ENST00000426099 345 ntBASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 KRT18P34-201ENST00000488218 1270 ntBASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AC027369.6-201ENST00000525520 931 ntBASIC17.79■□□□□ 0.44
VPS52Q8N1B4 MIR4492-201ENST00000581627 80 ntBASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms