Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 AC109635.5-201ENST00000533593 962 ntBASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 PDPK2P-202ENST00000562415 1191 ntBASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 PCDHA1-201ENST00000378133 2726 ntBASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 LINC02199-201ENST00000506655 2702 ntBASIC15.52■□□□□ 0.07
CCDC116Q8IYX3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 AC026691.1-201ENST00000602502 2017 ntBASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 AL022342.1-201ENST00000400363 863 ntBASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 AC023274.1-201ENST00000418278 595 ntBASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC116Q8IYX3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 AC006449.6-201ENST00000612330 2296 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 AL596087.1-201ENST00000400979 1969 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 MIR574-201ENST00000385209 96 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 AC068137.2-201ENST00000605408 478 ntBASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC116Q8IYX3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms