Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AL590787.1-201ENST00000568856 1315 ntBASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 CHCHD2P8-201ENST00000429873 447 ntBASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 DBET-201ENST00000630918 3363 ntBASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 AC104581.4-201ENST00000623126 3052 ntBASIC16.46■□□□□ 0.23
TRIM42Q8IWZ5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TRIM42Q8IWZ5 REXO1L8P-201ENST00000604378 1897 ntBASIC16.46■□□□□ 0.22
TRIM42Q8IWZ5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM42Q8IWZ5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 KRT18P56-201ENST00000507275 550 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 MIR4492-201ENST00000581627 80 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 AC092119.3-201ENST00000612618 583 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 NPAP1P7-201ENST00000613027 823 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 AC144831.1-201ENST00000573312 2656 ntBASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM42Q8IWZ5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 AC073347.1-201ENST00000421633 2643 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 AC091607.1-201ENST00000490318 1060 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 MPDU1-223ENST00000582151 728 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 AC092329.2-201ENST00000598402 547 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms