Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 MTCL1P1-201ENST00000446207 792 ntBASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 AC107956.1-201ENST00000494359 873 ntBASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 KRT18P6-201ENST00000555540 1265 ntBASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CROCCP3Q8IVE0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 KRT18P48-201ENST00000434763 852 ntBASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 AC128688.1-201ENST00000487626 519 ntBASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms