Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AP002414.2-201ENST00000591780 3365 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AC136632.2-201ENST00000512891 861 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AL589182.2-201ENST00000619332 1049 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 AD001527.2-201ENST00000622994 785 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 LINC02228-204ENST00000642115 2962 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 GPR89P-201ENST00000407924 1495 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 AP002414.3-201ENST00000589352 1468 ntBASIC16.28■□□□□ 0.2
HPS6Q86YV9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS6Q86YV9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS6Q86YV9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HPS6Q86YV9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS6Q86YV9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 AL596087.1-201ENST00000400979 1969 ntBASIC16.27■□□□□ 0.19
HPS6Q86YV9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HPS6Q86YV9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HPS6Q86YV9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 AL603832.2-201ENST00000566195 2125 ntBASIC16.27■□□□□ 0.19
HPS6Q86YV9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.27■□□□□ 0.19
HPS6Q86YV9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms