Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 AL583810.1-201ENST00000553344 1045 ntBASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 RN7SL219P-201ENST00000582872 296 ntBASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 AL022328.1-201ENST00000610050 478 ntBASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CNKSR3Q6P9H4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
CNKSR3Q6P9H4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 AC093525.8-201ENST00000624099 1342 ntBASIC17.45■□□□□ 0.38
CNKSR3Q6P9H4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TDH-203ENST00000531764 1110 ntBASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNKSR3Q6P9H4 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms