Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 RPS2P28-201ENST00000314255 741 ntBASIC16.82■□□□□ 0.28
CASC4Q6P4E1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.82■□□□□ 0.28
CASC4Q6P4E1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 IGHV3-65-201ENST00000523210 341 ntBASIC16.81■□□□□ 0.28
CASC4Q6P4E1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 AL121912.1-201ENST00000603683 238 ntBASIC16.81■□□□□ 0.28
CASC4Q6P4E1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 AC022188.1-201ENST00000620960 1664 ntBASIC16.81■□□□□ 0.28
CASC4Q6P4E1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASC4Q6P4E1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 LINC01144-201ENST00000626198 1710 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 MRPL20P1-201ENST00000400819 433 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 HNRNPDP1-201ENST00000439535 754 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 PGM5P2-202ENST00000637225 1043 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 AL161772.1-201ENST00000610494 4412 ntBASIC16.8■□□□□ 0.28
CASC4Q6P4E1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms