Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.55■□□□□ 0.56
SREBF2Q12772 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SREBF2Q12772 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.55■□□□□ 0.56
SREBF2Q12772 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SREBF2Q12772 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.55■□□□□ 0.56
SREBF2Q12772 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SREBF2Q12772 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SREBF2Q12772 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AC106760.1-201ENST00000508690 800 ntBASIC18.54■□□□□ 0.56
SREBF2Q12772 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.54■□□□□ 0.56
SREBF2Q12772 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AC015967.2-201ENST00000624092 234 ntBASIC18.54■□□□□ 0.56
SREBF2Q12772 AC006435.4-201ENST00000625037 234 ntBASIC18.54■□□□□ 0.56
SREBF2Q12772 AL356737.1-201ENST00000634391 234 ntBASIC18.54■□□□□ 0.56
SREBF2Q12772 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.54■□□□□ 0.56
SREBF2Q12772 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.54■□□□□ 0.56
SREBF2Q12772 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SREBF2Q12772 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.54■□□□□ 0.56
SREBF2Q12772 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.53■□□□□ 0.56
SREBF2Q12772 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SREBF2Q12772 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 Z93015.1-201ENST00000451718 390 ntBASIC18.53■□□□□ 0.56
SREBF2Q12772 AC104306.2-201ENST00000451877 341 ntBASIC18.53■□□□□ 0.56
SREBF2Q12772 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.53■□□□□ 0.56
SREBF2Q12772 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.53■□□□□ 0.56
SREBF2Q12772 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.53■□□□□ 0.56
SREBF2Q12772 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.53■□□□□ 0.56
SREBF2Q12772 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SREBF2Q12772 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.53■□□□□ 0.56
SREBF2Q12772 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SREBF2Q12772 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 AL607033.1-201ENST00000623900 1599 ntBASIC18.52■□□□□ 0.56
SREBF2Q12772 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SREBF2Q12772 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.52■□□□□ 0.56
SREBF2Q12772 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SREBF2Q12772 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.52■□□□□ 0.56
SREBF2Q12772 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.52■□□□□ 0.56
SREBF2Q12772 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SREBF2Q12772 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms