Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SSBP1Q04837 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 GRK6P1-201ENST00000400595 1711 ntBASIC13.93□□□□□ -0.18
SSBP1Q04837 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP1Q04837 RNF152P1-201ENST00000397754 604 ntBASIC13.92□□□□□ -0.18
SSBP1Q04837 AL645929.1-201ENST00000420084 975 ntBASIC13.92□□□□□ -0.18
SSBP1Q04837 SPDYE13P-201ENST00000445314 798 ntBASIC13.92□□□□□ -0.18
SSBP1Q04837 PAWRP1-201ENST00000451083 565 ntBASIC13.92□□□□□ -0.18
SSBP1Q04837 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP1Q04837 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP1Q04837 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP1Q04837 U82695.1-201ENST00000635752 1889 ntBASIC13.92□□□□□ -0.18
SSBP1Q04837 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SSBP1Q04837 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP1Q04837 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP1Q04837 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.91□□□□□ -0.18
SSBP1Q04837 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 AC117947.1-201ENST00000427448 529 ntBASIC13.91□□□□□ -0.18
SSBP1Q04837 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP1Q04837 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.91□□□□□ -0.18
SSBP1Q04837 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.91□□□□□ -0.18
SSBP1Q04837 REXO1L3P-201ENST00000622202 1288 ntBASIC13.91□□□□□ -0.18
SSBP1Q04837 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms