Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 AC244517.3-201ENST00000616254 1235 ntBASIC17.3■□□□□ 0.36
SKOR1P84550 AL805961.1-202ENST00000641562 540 ntBASIC17.3■□□□□ 0.36
SKOR1P84550 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SKOR1P84550 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SKOR1P84550 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SKOR1P84550 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.3■□□□□ 0.36
SKOR1P84550 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.3■□□□□ 0.36
SKOR1P84550 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.3■□□□□ 0.36
SKOR1P84550 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SKOR1P84550 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SKOR1P84550 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
SKOR1P84550 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SKOR1P84550 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
SKOR1P84550 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SKOR1P84550 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SKOR1P84550 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 AC010491.1-201ENST00000563101 2797 ntBASIC17.29■□□□□ 0.36
SKOR1P84550 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 RPS2P28-201ENST00000314255 741 ntBASIC17.29■□□□□ 0.36
SKOR1P84550 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.29■□□□□ 0.36
SKOR1P84550 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 RPL13AP23-201ENST00000480739 586 ntBASIC17.29■□□□□ 0.36
SKOR1P84550 RPS15P9-201ENST00000494093 319 ntBASIC17.29■□□□□ 0.36
SKOR1P84550 AC136632.2-201ENST00000512891 861 ntBASIC17.29■□□□□ 0.36
SKOR1P84550 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.29■□□□□ 0.36
SKOR1P84550 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.29■□□□□ 0.36
SKOR1P84550 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.29■□□□□ 0.36
SKOR1P84550 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SKOR1P84550 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SKOR1P84550 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.29■□□□□ 0.36
SKOR1P84550 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SKOR1P84550 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.28■□□□□ 0.36
SKOR1P84550 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.28■□□□□ 0.36
SKOR1P84550 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.28■□□□□ 0.36
SKOR1P84550 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 AL356488.2-201ENST00000602755 427 ntBASIC17.28■□□□□ 0.36
SKOR1P84550 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.28■□□□□ 0.36
SKOR1P84550 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.28■□□□□ 0.36
SKOR1P84550 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
SKOR1P84550 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SKOR1P84550 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms