Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.29□□□□□ -0.28
CX3CL1P78423 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.29□□□□□ -0.28
CX3CL1P78423 AC010507.1-201ENST00000633895 436 ntBASIC13.29□□□□□ -0.28
CX3CL1P78423 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 AC126755.1-201ENST00000525846 6405 ntBASIC13.29□□□□□ -0.28
CX3CL1P78423 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CX3CL1P78423 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CL1P78423 KRT8P39-201ENST00000396270 1433 ntBASIC13.29□□□□□ -0.28
CX3CL1P78423 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CL1P78423 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.29□□□□□ -0.28
CX3CL1P78423 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 SNX33P1-201ENST00000592116 1762 ntBASIC13.28□□□□□ -0.28
CX3CL1P78423 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.28□□□□□ -0.28
CX3CL1P78423 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CX3CL1P78423 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 AC007064.4-201ENST00000637740 555 ntBASIC13.28□□□□□ -0.28
CX3CL1P78423 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 AL645728.2-201ENST00000641974 660 ntBASIC13.28□□□□□ -0.28
CX3CL1P78423 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CX3CL1P78423 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CL1P78423 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CL1P78423 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CL1P78423 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CL1P78423 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CL1P78423 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CL1P78423 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CX3CL1P78423 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CL1P78423 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CL1P78423 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CL1P78423 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CL1P78423 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CL1P78423 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CL1P78423 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CL1P78423 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CL1P78423 RHOQP3-201ENST00000437982 621 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CL1P78423 AL591424.1-201ENST00000442569 1213 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.27□□□□□ -0.29
CX3CL1P78423 AL031432.2-201ENST00000566714 459 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 AL928711.1-201ENST00000570165 459 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CX3CL1P78423 AC023141.13-201ENST00000604991 943 ntBASIC13.27□□□□□ -0.29
CX3CL1P78423 AC027601.4-201ENST00000611259 610 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms