Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.16■□□□□ 0.34
IRX4P78413 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 LINC00628-201ENST00000628516 1289 ntBASIC17.16■□□□□ 0.34
IRX4P78413 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
IRX4P78413 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 HYMAI-201ENST00000635591 3347 ntBASIC17.16■□□□□ 0.34
IRX4P78413 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
IRX4P78413 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
IRX4P78413 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IRX4P78413 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IRX4P78413 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 MYCLP1-201ENST00000372451 1075 ntBASIC17.15■□□□□ 0.34
IRX4P78413 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.15■□□□□ 0.34
IRX4P78413 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.15■□□□□ 0.34
IRX4P78413 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.15■□□□□ 0.34
IRX4P78413 STK19B-204ENST00000512515 211 ntBASIC17.15■□□□□ 0.34
IRX4P78413 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
IRX4P78413 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 AC022145.2-201ENST00000598203 171 ntBASIC17.15■□□□□ 0.34
IRX4P78413 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
IRX4P78413 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX4P78413 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX4P78413 FLJ16779-201ENST00000612722 7638 ntBASIC17.14■□□□□ 0.34
IRX4P78413 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 AC023141.5-201ENST00000458585 616 ntBASIC17.14■□□□□ 0.33
IRX4P78413 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 AC069262.1-201ENST00000539058 672 ntBASIC17.14■□□□□ 0.33
IRX4P78413 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 AL353135.1-201ENST00000606729 504 ntBASIC17.14■□□□□ 0.33
IRX4P78413 REXO1L3P-201ENST00000622202 1288 ntBASIC17.14■□□□□ 0.33
IRX4P78413 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 AC132872.4-202ENST00000622924 2756 ntBASIC17.14■□□□□ 0.33
IRX4P78413 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms