Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LINC00554-201ENST00000564841 3011 ntBASIC17.28■□□□□ 0.36
USP46P62068 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
USP46P62068 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.27■□□□□ 0.36
USP46P62068 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.27■□□□□ 0.36
USP46P62068 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.27■□□□□ 0.36
USP46P62068 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.27■□□□□ 0.36
USP46P62068 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.27■□□□□ 0.36
USP46P62068 AC107890.1-201ENST00000422478 521 ntBASIC17.27■□□□□ 0.36
USP46P62068 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.27■□□□□ 0.36
USP46P62068 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.27■□□□□ 0.36
USP46P62068 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.27■□□□□ 0.36
USP46P62068 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP46P62068 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
USP46P62068 SPCS2P1-201ENST00000561636 679 ntBASIC17.27■□□□□ 0.36
USP46P62068 AC132872.1-201ENST00000566986 1195 ntBASIC17.27■□□□□ 0.36
USP46P62068 SPTSSB-204ENST00000617024 1292 ntBASIC17.27■□□□□ 0.36
USP46P62068 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.27■□□□□ 0.36
USP46P62068 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP46P62068 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP46P62068 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
USP46P62068 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.27■□□□□ 0.35
USP46P62068 FO538757.1-201ENST00000623083 1397 ntBASIC17.27■□□□□ 0.35
USP46P62068 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
USP46P62068 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP46P62068 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP46P62068 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 TREML5P-201ENST00000421694 576 ntBASIC17.26■□□□□ 0.35
USP46P62068 AC055876.3-201ENST00000431496 288 ntBASIC17.26■□□□□ 0.35
USP46P62068 AC093724.1-201ENST00000448659 1027 ntBASIC17.26■□□□□ 0.35
USP46P62068 HLA-J-202ENST00000469281 1241 ntBASIC17.26■□□□□ 0.35
USP46P62068 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.26■□□□□ 0.35
USP46P62068 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 AC138649.4-201ENST00000612222 287 ntBASIC17.26■□□□□ 0.35
USP46P62068 AC018529.1-201ENST00000613063 361 ntBASIC17.26■□□□□ 0.35
USP46P62068 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.26■□□□□ 0.35
USP46P62068 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP46P62068 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
USP46P62068 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.26■□□□□ 0.35
USP46P62068 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.26■□□□□ 0.35
USP46P62068 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP46P62068 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 AC092171.3-201ENST00000610122 2651 ntBASIC17.25■□□□□ 0.35
USP46P62068 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms