Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 AC233702.3-201ENST00000578656 1387 ntBASIC14.19□□□□□ -0.14
ACTBP60709 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
ACTBP60709 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.18□□□□□ -0.14
ACTBP60709 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.18□□□□□ -0.14
ACTBP60709 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.18□□□□□ -0.14
ACTBP60709 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 AC023157.3-201ENST00000619086 2088 ntBASIC14.18□□□□□ -0.14
ACTBP60709 AL671710.1-201ENST00000610245 2349 ntBASIC14.18□□□□□ -0.14
ACTBP60709 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ACTBP60709 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.18□□□□□ -0.14
ACTBP60709 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.18□□□□□ -0.14
ACTBP60709 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ACTBP60709 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.18□□□□□ -0.14
ACTBP60709 SIGLEC30P-201ENST00000455569 941 ntBASIC14.18□□□□□ -0.14
ACTBP60709 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.18□□□□□ -0.14
ACTBP60709 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.18□□□□□ -0.14
ACTBP60709 AC009533.2-201ENST00000543664 586 ntBASIC14.18□□□□□ -0.14
ACTBP60709 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.18□□□□□ -0.14
ACTBP60709 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.18□□□□□ -0.14
ACTBP60709 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.18□□□□□ -0.14
ACTBP60709 AC093458.2-201ENST00000623150 629 ntBASIC14.18□□□□□ -0.14
ACTBP60709 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.18□□□□□ -0.14
ACTBP60709 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.18□□□□□ -0.14
ACTBP60709 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ACTBP60709 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACTBP60709 C8orf49-201ENST00000525043 1968 ntBASIC14.18□□□□□ -0.14
ACTBP60709 AC112504.1-201ENST00000623415 1841 ntBASIC14.18□□□□□ -0.14
ACTBP60709 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ACTBP60709 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.17□□□□□ -0.14
ACTBP60709 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 MYO15B-237ENST00000642007 4893 ntBASIC14.17□□□□□ -0.14
ACTBP60709 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ACTBP60709 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.17□□□□□ -0.14
ACTBP60709 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ACTBP60709 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.17□□□□□ -0.14
ACTBP60709 NUS1P1-201ENST00000446295 882 ntBASIC14.17□□□□□ -0.14
ACTBP60709 MINOS1P3-201ENST00000457048 203 ntBASIC14.17□□□□□ -0.14
ACTBP60709 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 AC091607.1-201ENST00000490318 1060 ntBASIC14.17□□□□□ -0.14
ACTBP60709 AP005901.3-202ENST00000581653 237 ntBASIC14.17□□□□□ -0.14
ACTBP60709 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.17□□□□□ -0.14
ACTBP60709 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.17□□□□□ -0.14
ACTBP60709 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ACTBP60709 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ACTBP60709 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.16□□□□□ -0.14
ACTBP60709 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 AL031731.1-201ENST00000642131 2094 ntBASIC14.16□□□□□ -0.14
ACTBP60709 TNRC18P2-201ENST00000417666 2714 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms