Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 FTLP1-201ENST00000449155 526 ntBASIC13.66□□□□□ -0.22
RIPPLY3P57055 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 RARRES2P9-201ENST00000565168 469 ntBASIC13.66□□□□□ -0.22
RIPPLY3P57055 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 AP001527.2-201ENST00000614441 631 ntBASIC13.66□□□□□ -0.22
RIPPLY3P57055 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 AC103702.1-201ENST00000548801 2630 ntBASIC13.66□□□□□ -0.22
RIPPLY3P57055 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 USP32P1-208ENST00000506594 1164 ntBASIC13.65□□□□□ -0.22
RIPPLY3P57055 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AL033527.5-201ENST00000641382 801 ntBASIC13.65□□□□□ -0.22
RIPPLY3P57055 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.65□□□□□ -0.22
RIPPLY3P57055 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIPPLY3P57055 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RIPPLY3P57055 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIPPLY3P57055 AKR7A2P1-201ENST00000460134 915 ntBASIC13.64□□□□□ -0.23
RIPPLY3P57055 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.64□□□□□ -0.23
RIPPLY3P57055 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms