Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH8P55286 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH8P55286 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH8P55286 METTL21AP1-201ENST00000438852 635 ntBASIC17.49■□□□□ 0.39
CDH8P55286 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 HLA-J-203ENST00000494367 1087 ntBASIC17.49■□□□□ 0.39
CDH8P55286 AC098859.1-201ENST00000502915 1238 ntBASIC17.49■□□□□ 0.39
CDH8P55286 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 ALG1L8P-201ENST00000533887 760 ntBASIC17.49■□□□□ 0.39
CDH8P55286 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 LINC00628-201ENST00000628516 1289 ntBASIC17.49■□□□□ 0.39
CDH8P55286 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH8P55286 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH8P55286 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH8P55286 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH8P55286 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH8P55286 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 AC026150.2-201ENST00000564693 1156 ntBASIC17.48■□□□□ 0.39
CDH8P55286 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH8P55286 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDH8P55286 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH8P55286 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH8P55286 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDH8P55286 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH8P55286 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH8P55286 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH8P55286 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH8P55286 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH8P55286 SPDYE14P-201ENST00000442619 822 ntBASIC17.47■□□□□ 0.39
CDH8P55286 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH8P55286 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH8P55286 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH8P55286 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 AC093028.1-201ENST00000622998 982 ntBASIC17.47■□□□□ 0.39
CDH8P55286 U82695.1-201ENST00000635752 1889 ntBASIC17.47■□□□□ 0.39
CDH8P55286 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH8P55286 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH8P55286 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms