Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH4P55283 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CDH4P55283 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH4P55283 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH4P55283 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH4P55283 AC051619.7-201ENST00000568314 623 ntBASIC16.73■□□□□ 0.27
CDH4P55283 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH4P55283 MIR4321-201ENST00000592276 80 ntBASIC16.73■□□□□ 0.27
CDH4P55283 AC106028.4-201ENST00000614509 607 ntBASIC16.73■□□□□ 0.27
CDH4P55283 AC007967.4-201ENST00000614700 386 ntBASIC16.73■□□□□ 0.27
CDH4P55283 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH4P55283 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH4P55283 KLF2P3-201ENST00000451977 1087 ntBASIC16.72■□□□□ 0.27
CDH4P55283 CYMP-203ENST00000474680 1263 ntBASIC16.72■□□□□ 0.27
CDH4P55283 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH4P55283 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH4P55283 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH4P55283 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH4P55283 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH4P55283 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDH4P55283 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.71■□□□□ 0.27
CDH4P55283 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 AC125807.1-201ENST00000483097 614 ntBASIC16.71■□□□□ 0.27
CDH4P55283 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH4P55283 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH4P55283 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH4P55283 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH4P55283 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH4P55283 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDH4P55283 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms