Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL662844.4-201ENST00000606367 2838 ntBASIC17.57■□□□□ 0.4
RAD23BP54727 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
RAD23BP54727 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.56■□□□□ 0.4
RAD23BP54727 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.56■□□□□ 0.4
RAD23BP54727 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.56■□□□□ 0.4
RAD23BP54727 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.56■□□□□ 0.4
RAD23BP54727 AC073439.1-201ENST00000624121 1774 ntBASIC17.56■□□□□ 0.4
RAD23BP54727 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAD23BP54727 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC079140.1-201ENST00000508039 487 ntBASIC17.55■□□□□ 0.4
RAD23BP54727 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC105339.1-204ENST00000636249 355 ntBASIC17.55■□□□□ 0.4
RAD23BP54727 AC092364.2-201ENST00000596710 2692 ntBASIC17.55■□□□□ 0.4
RAD23BP54727 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.55■□□□□ 0.4
RAD23BP54727 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAD23BP54727 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.55■□□□□ 0.4
RAD23BP54727 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RAD23BP54727 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
RAD23BP54727 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
RAD23BP54727 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
RAD23BP54727 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAD23BP54727 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.54■□□□□ 0.4
RAD23BP54727 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAD23BP54727 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.54■□□□□ 0.4
RAD23BP54727 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.54■□□□□ 0.4
RAD23BP54727 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAD23BP54727 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAD23BP54727 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms