Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PRYP6-201ENST00000514804 343 ntBASIC16.17■□□□□ 0.18
LIMK1P53667 AC104989.1-201ENST00000519711 778 ntBASIC16.17■□□□□ 0.18
LIMK1P53667 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.17■□□□□ 0.18
LIMK1P53667 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.17■□□□□ 0.18
LIMK1P53667 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
LIMK1P53667 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIMK1P53667 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 AC133963.1-201ENST00000504166 1679 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.16■□□□□ 0.18
LIMK1P53667 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIMK1P53667 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.16■□□□□ 0.18
LIMK1P53667 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 SNX29P1-201ENST00000548357 1007 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 BANF1P1-201ENST00000553684 263 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.16■□□□□ 0.18
LIMK1P53667 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 AC015936.2-201ENST00000593177 259 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LIMK1P53667 TMEM261P1-201ENST00000604899 340 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 LINC01451-201ENST00000623792 534 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.16■□□□□ 0.18
LIMK1P53667 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK1P53667 AL109936.8-201ENST00000641772 604 ntBASIC16.16■□□□□ 0.18
LIMK1P53667 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.16■□□□□ 0.18
LIMK1P53667 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.16■□□□□ 0.18
LIMK1P53667 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.16■□□□□ 0.18
LIMK1P53667 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK1P53667 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 AC020907.1-201ENST00000616460 1350 ntBASIC16.15■□□□□ 0.18
LIMK1P53667 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK1P53667 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK1P53667 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LIMK1P53667 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.15■□□□□ 0.18
LIMK1P53667 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 BNIP3P42-201ENST00000454982 569 ntBASIC16.15■□□□□ 0.18
LIMK1P53667 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.15■□□□□ 0.18
LIMK1P53667 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.15■□□□□ 0.18
LIMK1P53667 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK1P53667 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
LIMK1P53667 BNIP3P29-201ENST00000598302 571 ntBASIC16.15■□□□□ 0.18
LIMK1P53667 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK1P53667 AC011447.5-201ENST00000616168 564 ntBASIC16.15■□□□□ 0.18
LIMK1P53667 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK1P53667 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms