Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 AC069335.1-201ENST00000489972 472 ntBASIC16.3■□□□□ 0.2
ZNF140P52738 AC112482.1-201ENST00000492080 688 ntBASIC16.3■□□□□ 0.2
ZNF140P52738 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF140P52738 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF140P52738 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF140P52738 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF140P52738 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 AL513210.1-201ENST00000629608 234 ntBASIC16.3■□□□□ 0.2
ZNF140P52738 AC105339.1-204ENST00000636249 355 ntBASIC16.3■□□□□ 0.2
ZNF140P52738 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF140P52738 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
ZNF140P52738 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF140P52738 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF140P52738 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF140P52738 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZNF140P52738 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 AC245100.5-201ENST00000452108 331 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF140P52738 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF140P52738 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF140P52738 KRT8P23-201ENST00000560090 1207 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 MIR3687-2-201ENST00000577708 61 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF140P52738 MIR3687-1-201ENST00000614492 61 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 SPTSSB-204ENST00000617024 1292 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 AC084121.4-201ENST00000641598 221 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 AF228730.8-201ENST00000642140 221 ntBASIC16.29■□□□□ 0.2
ZNF140P52738 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF140P52738 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF140P52738 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF140P52738 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF140P52738 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF140P52738 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF140P52738 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms