Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC026366.1-201ENST00000488803 879 ntBASIC16.18■□□□□ 0.18
GTF2A1P52655 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.18■□□□□ 0.18
GTF2A1P52655 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 AC124016.1-201ENST00000609552 612 ntBASIC16.18■□□□□ 0.18
GTF2A1P52655 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GTF2A1P52655 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GTF2A1P52655 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.18■□□□□ 0.18
GTF2A1P52655 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.18■□□□□ 0.18
GTF2A1P52655 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GTF2A1P52655 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
GTF2A1P52655 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
GTF2A1P52655 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 AP002982.1-201ENST00000492365 877 ntBASIC16.17■□□□□ 0.18
GTF2A1P52655 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.17■□□□□ 0.18
GTF2A1P52655 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.17■□□□□ 0.18
GTF2A1P52655 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
GTF2A1P52655 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GTF2A1P52655 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GTF2A1P52655 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
GTF2A1P52655 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 AC013726.1-201ENST00000563747 2285 ntBASIC16.16■□□□□ 0.18
GTF2A1P52655 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
GTF2A1P52655 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.16■□□□□ 0.18
GTF2A1P52655 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
GTF2A1P52655 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 RNA5SP413-201ENST00000516373 109 ntBASIC16.16■□□□□ 0.18
GTF2A1P52655 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 AC110285.5-201ENST00000611501 352 ntBASIC16.16■□□□□ 0.18
GTF2A1P52655 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GTF2A1P52655 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
GTF2A1P52655 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GTF2A1P52655 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.16■□□□□ 0.18
GTF2A1P52655 SDHAP2-201ENST00000455183 2001 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms