Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN4P51793 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN4P51793 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN4P51793 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLCN4P51793 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN4P51793 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCN4P51793 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN4P51793 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCN4P51793 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 AC017083.2-201ENST00000608069 979 ntBASIC17.17■□□□□ 0.34
CLCN4P51793 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN4P51793 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.17■□□□□ 0.34
CLCN4P51793 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CLCN4P51793 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
CLCN4P51793 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN4P51793 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN4P51793 ACA64.2-201ENST00000459014 129 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.16■□□□□ 0.34
CLCN4P51793 TPRX2P-201ENST00000535362 881 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 AC023310.3-201ENST00000557027 670 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 AC100756.1-201ENST00000562736 682 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 AC138749.3-201ENST00000567691 622 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 AC106886.1-201ENST00000568660 600 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN4P51793 AC116165.1-201ENST00000611806 668 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 MIR6069-201ENST00000620069 79 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 AL109936.8-201ENST00000641772 604 ntBASIC17.16■□□□□ 0.34
CLCN4P51793 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN4P51793 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN4P51793 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN4P51793 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLCN4P51793 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLCN4P51793 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN4P51793 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 AC080080.1-201ENST00000625121 2420 ntBASIC17.15■□□□□ 0.34
CLCN4P51793 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.15■□□□□ 0.34
CLCN4P51793 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 MEP1AP4-201ENST00000423244 1087 ntBASIC17.15■□□□□ 0.34
CLCN4P51793 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 AL139010.1-201ENST00000454878 894 ntBASIC17.15■□□□□ 0.34
CLCN4P51793 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CLCN4P51793 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms