Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF144AP50876 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
RNF144AP50876 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF144AP50876 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF144AP50876 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF144AP50876 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF144AP50876 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF144AP50876 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 HMGA1P7-201ENST00000406908 502 ntBASIC15.33■□□□□ 0.04
RNF144AP50876 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF144AP50876 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.33■□□□□ 0.04
RNF144AP50876 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF144AP50876 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF144AP50876 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF144AP50876 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF144AP50876 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 AP003680.1-201ENST00000598970 3660 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 AC092919.2-201ENST00000623631 1645 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF144AP50876 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF144AP50876 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF144AP50876 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF144AP50876 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF144AP50876 HLA-J-202ENST00000469281 1241 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 RN7SL602P-201ENST00000578326 324 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 AL513190.1-201ENST00000621254 727 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 AP001350.2-201ENST00000625104 1094 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 AC025580.3-201ENST00000617932 1424 ntBASIC15.32■□□□□ 0.04
RNF144AP50876 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF144AP50876 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF144AP50876 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF144AP50876 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF144AP50876 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms