Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.7■□□□□ 0.1
PRIM2P49643 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PRIM2P49643 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.7■□□□□ 0.1
PRIM2P49643 HNRNPDP1-201ENST00000439535 754 ntBASIC15.7■□□□□ 0.1
PRIM2P49643 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.7■□□□□ 0.1
PRIM2P49643 AC104692.2-201ENST00000603054 253 ntBASIC15.7■□□□□ 0.1
PRIM2P49643 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 AL353732.1-201ENST00000569618 1459 ntBASIC15.7■□□□□ 0.1
PRIM2P49643 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 GGT3P-204ENST00000453783 1664 ntBASIC15.7■□□□□ 0.1
PRIM2P49643 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRIM2P49643 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.7■□□□□ 0.1
PRIM2P49643 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRIM2P49643 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRIM2P49643 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRIM2P49643 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.69■□□□□ 0.1
PRIM2P49643 MRPL20P1-201ENST00000400819 433 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 TPM4P1-201ENST00000436100 807 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 AP002469.2-201ENST00000531724 424 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.69■□□□□ 0.1
PRIM2P49643 AL773604.1-201ENST00000617417 272 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 AP001350.2-201ENST00000625104 1094 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 FAM215A-202ENST00000632077 792 ntBASIC15.69■□□□□ 0.1
PRIM2P49643 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.69■□□□□ 0.1
PRIM2P49643 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.69■□□□□ 0.1
PRIM2P49643 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRIM2P49643 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRIM2P49643 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PRIM2P49643 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRIM2P49643 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
PRIM2P49643 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRIM2P49643 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRIM2P49643 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 AC092850.2-201ENST00000623821 2697 ntBASIC15.68■□□□□ 0.1
PRIM2P49643 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRIM2P49643 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.68■□□□□ 0.1
PRIM2P49643 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms