Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A3P48764 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A3P48764 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 ELK2BP-201ENST00000415014 1224 ntBASIC15.13■□□□□ 0.01
SLC9A3P48764 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC9A3P48764 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC9A3P48764 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 AC021087.4-201ENST00000563761 564 ntBASIC15.13■□□□□ 0.01
SLC9A3P48764 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 DBET-201ENST00000630918 3363 ntBASIC15.13■□□□□ 0.01
SLC9A3P48764 AC107918.4-202ENST00000641623 219 ntBASIC15.13■□□□□ 0.01
SLC9A3P48764 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC9A3P48764 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.13■□□□□ 0.01
SLC9A3P48764 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC9A3P48764 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A3P48764 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A3P48764 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.12■□□□□ 0.01
SLC9A3P48764 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 AL512652.2-201ENST00000625156 1716 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 AC006504.4-201ENST00000592118 1568 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC9A3P48764 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC9A3P48764 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 SLC25A6P2-201ENST00000497974 877 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 AC005412.3-201ENST00000580309 715 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC9A3P48764 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC9A3P48764 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 AC129492.6-201ENST00000611383 1305 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 AL031731.1-201ENST00000642131 2094 ntBASIC15.12■□□□□ 0.01
SLC9A3P48764 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC9A3P48764 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC9A3P48764 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms