Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GRIA4P48058 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.82■□□□□ 0.28
GRIA4P48058 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 AL031055.1-201ENST00000606362 631 ntBASIC16.82■□□□□ 0.28
GRIA4P48058 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
GRIA4P48058 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
GRIA4P48058 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRIA4P48058 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIA4P48058 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 AKAP8P1-201ENST00000434743 1349 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GRIA4P48058 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PMS2P4-201ENST00000412466 1052 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 TFAMP1-201ENST00000412727 736 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 AL592309.1-201ENST00000443127 649 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 CNN2P2-201ENST00000443536 909 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 CNN2P3-201ENST00000450201 906 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.81■□□□□ 0.28
GRIA4P48058 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
GRIA4P48058 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.81■□□□□ 0.28
GRIA4P48058 RARRES2P8-201ENST00000566335 367 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIA4P48058 AL136317.3-201ENST00000618497 906 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 AL161645.1-201ENST00000622716 1255 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIA4P48058 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
GRIA4P48058 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 AL671710.1-201ENST00000610245 2349 ntBASIC16.81■□□□□ 0.28
GRIA4P48058 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIA4P48058 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.81■□□□□ 0.28
GRIA4P48058 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIA4P48058 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIA4P48058 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GRIA4P48058 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA4P48058 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA4P48058 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIA4P48058 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA4P48058 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GRIA4P48058 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA4P48058 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA4P48058 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA4P48058 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms