Protein–RNA interactions for Protein: P43694

GATA4, Transcription factor GATA-4, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GATA4P43694 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GATA4P43694 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.74□□□□□ -0.21
GATA4P43694 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
GATA4P43694 AC018529.1-201ENST00000613063 361 ntBASIC13.74□□□□□ -0.21
GATA4P43694 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
GATA4P43694 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GATA4P43694 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
GATA4P43694 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GATA4P43694 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GATA4P43694 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
GATA4P43694 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.73□□□□□ -0.21
GATA4P43694 MIR648-201ENST00000385046 94 ntBASIC13.73□□□□□ -0.21
GATA4P43694 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.73□□□□□ -0.21
GATA4P43694 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.73□□□□□ -0.21
GATA4P43694 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 AC025678.2-201ENST00000562061 970 ntBASIC13.73□□□□□ -0.21
GATA4P43694 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.73□□□□□ -0.21
GATA4P43694 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.73□□□□□ -0.21
GATA4P43694 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.73□□□□□ -0.21
GATA4P43694 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GATA4P43694 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GATA4P43694 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GATA4P43694 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GATA4P43694 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
GATA4P43694 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GATA4P43694 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
GATA4P43694 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.72□□□□□ -0.21
GATA4P43694 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms