Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A1P43005 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A1P43005 RHOQP3-201ENST00000437982 621 ntBASIC17.2■□□□□ 0.34
SLC1A1P43005 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC1A1P43005 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A1P43005 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SLC1A1P43005 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLC1A1P43005 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 AC132872.4-202ENST00000622924 2756 ntBASIC17.19■□□□□ 0.34
SLC1A1P43005 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC1A1P43005 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC1A1P43005 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.19■□□□□ 0.34
SLC1A1P43005 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 FER1L4-210ENST00000615531 5998 ntBASIC17.19■□□□□ 0.34
SLC1A1P43005 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC1A1P43005 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC1A1P43005 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC1A1P43005 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A1P43005 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC1A1P43005 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC1A1P43005 AC093724.1-201ENST00000448659 1027 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A1P43005 RNA5SP419-201ENST00000515908 135 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 RNA5SP415-201ENST00000517246 115 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 IGHV3-22-201ENST00000520721 359 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 AP001005.1-201ENST00000571755 1248 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC1A1P43005 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SLC1A1P43005 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SLC1A1P43005 AL009183.1-201ENST00000603760 355 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 AC007064.4-201ENST00000637740 555 ntBASIC17.18■□□□□ 0.34
SLC1A1P43005 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A1P43005 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A1P43005 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A1P43005 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC1A1P43005 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC1A1P43005 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC1A1P43005 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC1A1P43005 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SLC1A1P43005 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A1P43005 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms