Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.58□□□□□ -0.23
SNCAP37840 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNCAP37840 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNCAP37840 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNCAP37840 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNCAP37840 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNCAP37840 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SNCAP37840 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNCAP37840 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SNCAP37840 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SNCAP37840 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SNCAP37840 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SNCAP37840 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 AC096582.2-201ENST00000510860 516 ntBASIC13.58□□□□□ -0.24
SNCAP37840 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.58□□□□□ -0.24
SNCAP37840 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.58□□□□□ -0.24
SNCAP37840 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SNCAP37840 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNCAP37840 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.58□□□□□ -0.24
SNCAP37840 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCAP37840 AC233702.3-201ENST00000578656 1387 ntBASIC13.58□□□□□ -0.24
SNCAP37840 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SNCAP37840 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.57□□□□□ -0.24
SNCAP37840 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SNCAP37840 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 RCN1P1-201ENST00000400413 996 ntBASIC13.57□□□□□ -0.24
SNCAP37840 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.57□□□□□ -0.24
SNCAP37840 ACTG1P4-201ENST00000425123 1122 ntBASIC13.57□□□□□ -0.24
SNCAP37840 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.57□□□□□ -0.24
SNCAP37840 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 TSSC2-201ENST00000450217 709 ntBASIC13.57□□□□□ -0.24
SNCAP37840 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.57□□□□□ -0.24
SNCAP37840 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.57□□□□□ -0.24
SNCAP37840 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SNCAP37840 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SNCAP37840 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms