Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 AC005593.1-201ENST00000624894 515 ntBASIC18.02■□□□□ 0.48
KRT9P35527 FAM215A-202ENST00000632077 792 ntBASIC18.02■□□□□ 0.48
KRT9P35527 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
KRT9P35527 AC104640.1-201ENST00000562617 2109 ntBASIC18.02■□□□□ 0.47
KRT9P35527 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT9P35527 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT9P35527 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.02■□□□□ 0.47
KRT9P35527 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.02■□□□□ 0.47
KRT9P35527 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.02■□□□□ 0.47
KRT9P35527 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
KRT9P35527 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KRT9P35527 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT9P35527 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 AP002414.3-201ENST00000589352 1468 ntBASIC18.01■□□□□ 0.47
KRT9P35527 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
KRT9P35527 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 SLC25A6P2-201ENST00000497974 877 ntBASIC18.01■□□□□ 0.47
KRT9P35527 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT9P35527 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 AC008667.4-201ENST00000607370 168 ntBASIC18.01■□□□□ 0.47
KRT9P35527 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT9P35527 AP005117.1-202ENST00000581724 1908 ntBASIC18.01■□□□□ 0.47
KRT9P35527 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT9P35527 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT9P35527 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
KRT9P35527 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KRT9P35527 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT9P35527 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18■□□□□ 0.47
KRT9P35527 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18■□□□□ 0.47
KRT9P35527 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT9P35527 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18■□□□□ 0.47
KRT9P35527 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 AC010654.1-201ENST00000615722 808 ntBASIC18■□□□□ 0.47
KRT9P35527 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18■□□□□ 0.47
KRT9P35527 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT9P35527 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 FES-204ENST00000414248 2327 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 CDC14C-201ENST00000428251 1719 ntBASIC18■□□□□ 0.47
KRT9P35527 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18■□□□□ 0.47
KRT9P35527 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT9P35527 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18■□□□□ 0.47
KRT9P35527 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18■□□□□ 0.47
KRT9P35527 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT9P35527 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT9P35527 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms