Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 KRT8P10-201ENST00000450021 1447 ntBASIC18.74■□□□□ 0.59
CLCN1P35523 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN1P35523 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN1P35523 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.74■□□□□ 0.59
CLCN1P35523 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 VENTXP7-201ENST00000475503 772 ntBASIC18.74■□□□□ 0.59
CLCN1P35523 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.74■□□□□ 0.59
CLCN1P35523 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CLCN1P35523 AC011467.2-201ENST00000598425 242 ntBASIC18.74■□□□□ 0.59
CLCN1P35523 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN1P35523 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN1P35523 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN1P35523 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLCN1P35523 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 AC103564.2-201ENST00000432853 1299 ntBASIC18.73■□□□□ 0.59
CLCN1P35523 KRT17P6-201ENST00000453795 1220 ntBASIC18.73■□□□□ 0.59
CLCN1P35523 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN1P35523 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN1P35523 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN1P35523 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CLCN1P35523 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN1P35523 BNIP3P18-201ENST00000593976 575 ntBASIC18.73■□□□□ 0.59
CLCN1P35523 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 AC091076.1-201ENST00000610741 619 ntBASIC18.73■□□□□ 0.59
CLCN1P35523 AC009090.5-201ENST00000624886 2285 ntBASIC18.73■□□□□ 0.59
CLCN1P35523 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CLCN1P35523 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN1P35523 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN1P35523 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLCN1P35523 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.72■□□□□ 0.59
CLCN1P35523 TP73-AS1-210ENST00000637775 1455 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCN1P35523 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CLCN1P35523 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN1P35523 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.72■□□□□ 0.59
CLCN1P35523 LINC00265-3P-201ENST00000447588 903 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN1P35523 Z69720.1-201ENST00000601483 472 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 AC069148.1-201ENST00000608741 768 ntBASIC18.72■□□□□ 0.59
CLCN1P35523 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.72■□□□□ 0.59
CLCN1P35523 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms