Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
GPC1P35052 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
GPC1P35052 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GPC1P35052 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GPC1P35052 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.66■□□□□ 0.1
GPC1P35052 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 GGT4P-201ENST00000623672 1708 ntBASIC15.66■□□□□ 0.1
GPC1P35052 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC1P35052 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
GPC1P35052 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 CRYGEP-201ENST00000412192 528 ntBASIC15.66■□□□□ 0.1
GPC1P35052 PRSS29P-201ENST00000440800 595 ntBASIC15.66■□□□□ 0.1
GPC1P35052 AL513480.1-201ENST00000451731 511 ntBASIC15.66■□□□□ 0.1
GPC1P35052 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.66■□□□□ 0.1
GPC1P35052 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC1P35052 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GPC1P35052 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GPC1P35052 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC1P35052 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC1P35052 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GPC1P35052 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC1P35052 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GPC1P35052 PCGF3-213ENST00000620529 1899 ntBASIC15.65■□□□□ 0.1
GPC1P35052 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.65■□□□□ 0.1
GPC1P35052 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GPC1P35052 GPAA1P2-202ENST00000606848 1787 ntBASIC15.65■□□□□ 0.1
GPC1P35052 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GPC1P35052 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.65■□□□□ 0.1
GPC1P35052 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC1P35052 FAM185BP-201ENST00000443595 716 ntBASIC15.65■□□□□ 0.1
GPC1P35052 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.65■□□□□ 0.1
GPC1P35052 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.65■□□□□ 0.1
GPC1P35052 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC1P35052 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.65■□□□□ 0.1
GPC1P35052 UNC93B6-202ENST00000528242 690 ntBASIC15.65■□□□□ 0.1
GPC1P35052 OR7E47P-204ENST00000575924 449 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms